CDS

Accession Number TCMCG047C24463
gbkey CDS
Protein Id GFQ03029.1
Location complement(join(553224..553475,553603..553746,554063..554187,554294..554372,554841..554933,555096..555152,555236..555361))
Organism Phtheirospermum japonicum
locus_tag PHJA_002446700

Protein

Length 291aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000794.1
Definition exosome complex component rrp42 [Phtheirospermum japonicum]
Locus_tag PHJA_002446700

EGGNOG-MAPPER Annotation

COG_category J
Description 3' exoribonuclease family, domain 2
KEGG_TC -
KEGG_Module M00390        [VIEW IN KEGG]
M00391        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12589        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000175        [VIEW IN EMBL-EBI]
GO:0000176        [VIEW IN EMBL-EBI]
GO:0000177        [VIEW IN EMBL-EBI]
GO:0000178        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000459        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000467        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0004532        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008408        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016073        [VIEW IN EMBL-EBI]
GO:0016075        [VIEW IN EMBL-EBI]
GO:0016078        [VIEW IN EMBL-EBI]
GO:0016180        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016796        [VIEW IN EMBL-EBI]
GO:0016896        [VIEW IN EMBL-EBI]
GO:0017091        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031125        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034472        [VIEW IN EMBL-EBI]
GO:0034473        [VIEW IN EMBL-EBI]
GO:0034475        [VIEW IN EMBL-EBI]
GO:0034476        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0034661        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043488        [VIEW IN EMBL-EBI]
GO:0043628        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0043633        [VIEW IN EMBL-EBI]
GO:0043634        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071025        [VIEW IN EMBL-EBI]
GO:0071027        [VIEW IN EMBL-EBI]
GO:0071028        [VIEW IN EMBL-EBI]
GO:0071029        [VIEW IN EMBL-EBI]
GO:0071035        [VIEW IN EMBL-EBI]
GO:0071038        [VIEW IN EMBL-EBI]
GO:0071042        [VIEW IN EMBL-EBI]
GO:0071046        [VIEW IN EMBL-EBI]
GO:0071047        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090503        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1905354        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGGGTCTTTCACTCGGAGAGCAAAACTTCATAAAGGGTGGAATTGCTCAGGATCTGCGTACTGATGGTCGCAAACGATTAGCTTACCGACCCATTTCTGTGGAAACTGGTGTCATTCCTCAGGCAAGTGGCTCAGCAAGAGTCAAGTTTGGGGCAACAGATGTTATTGCAAGTGTGAAGGCTGAGCTTGGAAAGCCAAATCCATCTCATCCTGACAAAGGAAAAGTTTCTATATATGTAGATTGCAGCCCAACAGCTGAGCCAACTTTTGAGGGCAGAGGGGGTGAGGAATTATCCGCAGAGCTCTCATCAGCACTTCAACGATGTCTGTTGGGTGGTAAAAGTGGGGCAGGAGCTGGGATTGATCTCTCATCTCTATCCATTGTTGAAGGGAAGGTCTGTTGGGATCTGTATATTGATGGTCTTGTTGTTAGTTCAGATGGAAATGTGCTGGATGCATTGGGAGCTGCTATTAAGGCAGCTCTAAGCAATACAGCTATTCCGAAAGTCCAAGTTGCTGCCAATGCCTCCTCTGATGAGCAGCCAGAGGTTGATGTGAGCGATGAGGAGTTTCTACAATTTGACACGACAGGGGTCCCTGTATTAATTACTTTAACCAAGGTTGGGAGGCATTATATCGTGGACGCAACTACGGAAGAGGAGTCCCAAATGAGTTCGGCTCTCTCTGTTTCTATAAATAGGCAAGGCCAGATATGCGGACTGACAAAAAGAGGTGGGGCCGGCCTTGACCCGAGCGTTATACTCGACATGATATCTGTTGCGAAACATGTGAGTGAGCAGTTGATGAACAAATTGGATTCTGAAATAGCTGCAGCCGAAGCCTGCGACGAAGATGATGAGATGGATTCTTAG
Protein:  
MVGLSLGEQNFIKGGIAQDLRTDGRKRLAYRPISVETGVIPQASGSARVKFGATDVIASVKAELGKPNPSHPDKGKVSIYVDCSPTAEPTFEGRGGEELSAELSSALQRCLLGGKSGAGAGIDLSSLSIVEGKVCWDLYIDGLVVSSDGNVLDALGAAIKAALSNTAIPKVQVAANASSDEQPEVDVSDEEFLQFDTTGVPVLITLTKVGRHYIVDATTEEESQMSSALSVSINRQGQICGLTKRGGAGLDPSVILDMISVAKHVSEQLMNKLDSEIAAAEACDEDDEMDS